Welcome to EDTA-GUI. This version provides a graphical interface that streamlines your work and research in annotating transposable elements. The performance of the annotation process depends on your machine's specifications, so ensure it remains powered on during execution. For any questions or further information, use the icon  .
Data input
Email Adress
Genome data
Additional features
Mode
Species specification to identify TIR candidates
Steps to be executed
TE Analysis Parameters
Overwrite |
|
Deactivated |
Sensitivity |
|
Deactivated |
Annotation |
|
Deactivated |
Evaluate |
|
Deactivated |
Force |
|
Deactivated |
TIR filter |
|
Deactivated |
Annot. type |
|
Deactivated |
Run LAI |
|
Enable |
Threads
Additional input files
(Field not required)Coding DNA Sequence (cds)
Curate library (curatedlib)
Exclusion of masked regions (exclude)
RepeatModeler library (rmlib)
RepeatMasker library (rmout)